PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc02110.1.g00100.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 175aa    MW: 19560.3 Da    PI: 8.794
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc02110.1.g00100.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-182372255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  +y+GVr +k +g+Wv+eIr p   g ++r++lg+f +ae+Aa+a++ a+++l+g
  Zpz_sc02110.1.g00100.1.am.mk 23 QYRGVRKRK-WGKWVSEIRQP---GTKTRIWLGSFESAEMAAAAHDVAALRLRG 72
                                  69****999.**********8...325*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.61E-212280No hitNo description
SuperFamilySSF541711.11E-212381IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.4E-312380IPR001471AP2/ERF domain
SMARTSM003801.9E-352386IPR001471AP2/ERF domain
PROSITE profilePS5103223.5252380IPR001471AP2/ERF domain
PRINTSPR003674.6E-102435IPR001471AP2/ERF domain
PfamPF008477.0E-122472IPR001471AP2/ERF domain
PRINTSPR003674.6E-104662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MDHMAATDLL LPTITSGQRP QQQYRGVRKR KWGKWVSEIR QPGTKTRIWL GSFESAEMAA  60
AAHDVAALRL RGRDAQLNFP GSVGWLPPTS AQRRPRPPTG CGASRRWCRR GAPTRTCRTV  120
ELAGSDEEFD LDLGSPRLWA EMAEAMLLDP PRLDMGVSDM EVTQCWSHGS LWDAC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-162283163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A1e-162280463ATERF1
3gcc_A1e-162280463ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9581356e-80EU958135.1 Zea mays clone 1674836 dehydration-responsive element-binding protein 1D mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004975709.13e-61PREDICTED: ethylene-responsive transcription factor ERF027-like
TrEMBLA0A0A9BXV19e-68A0A0A9BXV1_ARUDO; Uncharacterized protein
STRINGLOC_Os04g36640.16e-55(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22443389
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.13e-23ERF family protein